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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.003G136300.1 |
Common Name | POPTR_0003s13610g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 351aa MW: 39010.2 Da PI: 6.0119 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.003G136300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.6 | 3.7e-19 | 127 | 178 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
++++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ +l+g+
Potri.003G136300.1 127 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDNAAIQLRGA 178
59********.**********72....45*************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 351 aa
Download sequence Send
to blast |
MKMDHPVKFT EHRNQTKLSA PFLSNPVQYS KPPKIVRISV TDTYATDSSS DEENEVSRVS 60 SRKRHVTRVK KFVNEITIEP SAPPSRTADC VTSDTGLRAR PSRSARKKVG VDVSQARRLP 120 ATGVVGKKFR GVRQRPWGKW AAEIRDPLRR VRLWLGTYDT AEEAAMVYDN AAIQLRGADA 180 LTNFVTPPAR CSPAAATSGY ISGDESNSNH NINNDNVNVS SPISVLRFSE EAESQSVGSS 240 RETRKTGNEV REVKEDSCVS ENFSDFSEHN SSIDSLFPPT TDIYEFRSSV RGIFEETTIF 300 ADGGFLKDDD FRDMDLDFGF GFGFGLSSWN VQDHFQDIGD LFWSDSLIAI *
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