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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.003G132700.1 |
Common Name | POPTR_0003s13250g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
WRKY |
Protein Properties |
Length: 331aa MW: 37033.6 Da PI: 5.4546 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.003G132700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 94 | 1.1e-29 | 153 | 211 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++prsYYrC+s gC ++k++ers++dp++++itY+ eH h
Potri.003G132700.1 153 SDMWAWRKYGQKPIKGSPYPRSYYRCSSLkGCLARKQMERSRTDPSTFIITYTAEHSHA 211
79*************************998****************************6 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MMDEFVCMED SWDLHAVVRS GSSTNYEDFA NITNNPPSLF APLSFYQDEL LNFQETPTDF 60 DGLDGLYKPL YPLLHQTFNS PQSNILSTSI STTSISVPKE VKERQKVQKK KPVSPESATF 120 ANTVDATSAA KSKRRKNQHK KVVQHVKEDG LSSDMWAWRK YGQKPIKGSP YPRSYYRCSS 180 LKGCLARKQM ERSRTDPSTF IITYTAEHSH AHPTRRSSLA GSTRIKPSMP KEATKNIEPN 240 MPTIKDELSP NFDGVLSPTT PSVTSIEDEL VQNVCIKNEE LLDQGQVLDE IALPDILFSD 300 ELFPSIEDLE GLLLDEFADC RSSNIPTTSS *
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