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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.003G104500.1 |
Common Name | POPTR_0003s10360g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
Trihelix |
Protein Properties |
Length: 301aa MW: 35284.8 Da PI: 8.055 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.003G104500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 71.6 | 1.4e-22 | 44 | 126 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W qe+++ i +r +e+++ +k++++lWe vs+kmre+g+ +r+p+qCk+kw+nl yk ++++ + + ++cp+f++l+
Potri.003G104500.1 44 QWGLQETKEFIGIRAGLEKDFAVTKRNETLWEIVSAKMREKGYyRRTPEQCKCKWKNLVSLYKGKETSDPE----TGRQCPFFEELH 126
7*****************************************9788******************9999997....4678******98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MMFRSGGGEG DAGLGWINMM PTAAMLSPTA EISPRGPAPP QHPQWGLQET KEFIGIRAGL 60 EKDFAVTKRN ETLWEIVSAK MREKGYYRRT PEQCKCKWKN LVSLYKGKET SDPETGRQCP 120 FFEELHEVFT ERAKNMQRLL LESEAGSTQS RKKVKRINGD RSSDELSEDE DEDESEEEKP 180 ARNNSRKRKG EKNVAEKSPR PSSSSFGGVQ EMLKEFFQQQ QKMEMQWREL MEKRAHERQM 240 FEQEWRRSMD KLERERLMIE QAWREREEQR RIREESRAER RDALLTALLN KLISENTMKD 300 *
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