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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.003G018300.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
B3 |
Protein Properties |
Length: 237aa MW: 27137.1 Da PI: 4.7283 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.003G018300.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 31.2 | 3.9e-10 | 4 | 90 | 1 | 88 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88
f kvl d+ + r+++p +++e+ g+ +s++l ++d+ g+ +++ ++ ++ vl+ GW +Fv++ gL++gD+vv+++++++
Potri.003G018300.1 4 FSKVL--RDTDVHVRFSFPTHCLEHLdfAGN--NSVDLYVKDSCGELRVIRCLKrNGVYDKPVLSMGWLKFVDDYGLRVGDMVVLHREDDH 90
56777..566666789***999966676444..799*********99999995524444559************************76553 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 237 aa
Download sequence Send
to blast |
MQIFSKVLRD TDVHVRFSFP THCLEHLDFA GNNSVDLYVK DSCGELRVIR CLKRNGVYDK 60 PVLSMGWLKF VDDYGLRVGD MVVLHREDDH NLGSQFMIEA KRRMKLFGEE DWGEDLLRGC 120 WVLLDTCLME FLLEMDFLSM TDGYSKRNCW DETWKLFDSM SVEGNVEPEE VTMIAARSAC 180 SQKGGGIFDT MGVRDVFSWT RMVNGYAKSG ELELARMSFN EMPERNVVSW SAMIAG*
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC210344 | 0.0 | AC210344.1 Populus trichocarpa clone POP100-P10, complete sequence. |