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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.003G000400.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ZF-HD |
Protein Properties |
Length: 254aa MW: 28007.7 Da PI: 7.9191 |
Description |
ZF-HD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.003G000400.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | ZF-HD_dimer | 101.6 | 5.3e-32 | 66 | 123 | 2 | 60 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
+ vrY+eClkNhAa++Gg+a+DGCgEfmps geeg+++al+C+AC+CHRnFHRre e e
Potri.003G000400.1 66 KMVRYRECLKNHAAAMGGNATDGCGEFMPS-GEEGSIEALTCSACNCHRNFHRREIEGE 123
679**************************9.999*********************9865 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 254 aa
Download sequence Send
to blast |
MELSSREGEI PIPLNAFGGG HGHLIQYDHA ATHNHIISST APQIPSNNGP SITTASIDDN 60 HVPYKKMVRY RECLKNHAAA MGGNATDGCG EFMPSGEEGS IEALTCSACN CHRNFHRREI 120 EGEHTSSPEA LGYPTATGTL VPPRAAAPHH QMIMSYNMGS LPSESDEQED GGGVVMARPA 180 QLMKKRYRTK FTQEQKEKML NFAEKVGWKL QKQEETVVQQ FCQEIGIKRR VLKVWMHNNK 240 LNLAKKNPST TTI*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Not detected in the meristem prior to exposure to long days (LDs), but after exposure to three LDs, stable accumulation on the flanks of the meristem adjacent to floral primordia, during floral induction. {ECO:0000269|PubMed:22319055}. |
Uniprot | TISSUE SPECIFICITY: Mostly expressed in flowers and inflorescence. {ECO:0000269|PubMed:16428600}. |
Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor. Probably involved in the regulation of floral induction. {ECO:0000269|PubMed:22319055}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by exposure to long days. {ECO:0000269|PubMed:22319055}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC216410 | 0.0 | AC216410.1 Populus trichocarpa clone POP030-A06, complete sequence. |