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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.002G243300.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
Trihelix |
Protein Properties |
Length: 295aa MW: 33991.1 Da PI: 5.9301 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.002G243300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 62.3 | 1.1e-19 | 33 | 120 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
Wt+qe+ +Li+a++e++ +l+rg+lk+ +Weev+ + ++s++qC++k+e+l++ry+ +k+ + + + ++yfd ++
Potri.002G243300.1 33 WTHQETIHLIQAYQEKWYSLKRGQLKASQWEEVAVTVaarcgyDYNHPSKSAVQCRHKMEKLRRRYRDEKRVMALG---GTCYWQYFDLMD 120
***********************************998666654445589************************97...5669*****997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MSTPSPSPSP PPPHSPPTNP TPLSSKKTQP LPWTHQETIH LIQAYQEKWY SLKRGQLKAS 60 QWEEVAVTVA ARCGYDYNHP SKSAVQCRHK MEKLRRRYRD EKRVMALGGT CYWQYFDLMD 120 SLERGPLPIS AQPLARVPCQ ENYHTRNRNN GVLGEYDDDK GEDEDDDDDE DYGYRSKLRS 180 RSINYILRKP SIVNRYAGGG PSGVSREAEK KRKREEVEEE EEEEEEEEEG EGVEMGLAGQ 240 IKAFSERMVK LERKKLEVMK ETERSRMEME NKKLEMILDS HSKIVHMIGE AFGL*
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