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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.002G221600.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
WRKY |
Protein Properties |
Length: 369aa MW: 40907.4 Da PI: 7.4973 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.002G221600.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 93 | 2.2e-29 | 104 | 161 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
+Dgy+WrKYGqK vkg+ef rsYY+Ct+++C+vkk++e+s+ d+k+ +i+Y geH+h+k
Potri.002G221600.1 104 EDGYRWRKYGQKLVKGNEFIRSYYKCTHPSCQVKKQLECSH-DGKLADIVYIGEHEHPK 161
7***************************************9.***************85 PP
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2 | WRKY | 104.9 | 4.2e-33 | 270 | 328 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK vkg+++prsYYrC+s+gCpvkk+ver+ +dpk+v++ Yeg+H+h+
Potri.002G221600.1 270 VNDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERAYNDPKLVITSYEGQHDHD 328
58********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 369 aa
Download sequence Send
to blast |
MVSSEEVSPK ELQKRQSLDG GTDTAQQTRG SGGDASQQEG IPPSNAPEKR FENTGGRILQ 60 LDKEGSVSSL TPRKLSHTPG SDLHSLQSGQ ERWSPSIMRE KVSEDGYRWR KYGQKLVKGN 120 EFIRSYYKCT HPSCQVKKQL ECSHDGKLAD IVYIGEHEHP KPQLNLPQAV GCDLSTVEEK 180 PDNLLLTAVE ESQAPNPIEP TTTSQISTVT SSEYVKRVLS EPNRIRDEID DDQRSKQRKK 240 GNCNDDSTPL DKPTGEPRLV IQTKCEVDTV NDGYRWRKYG QKLVKGNPNP RSYYRCSSPG 300 CPVKKHVERA YNDPKLVITS YEGQHDHDMP PSRTVAQNTT GLNTCTTTIQ NGVSGAKSGE 360 SDAISHFP*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed to similar levels in root and flower, to a somewhat lower level in stem and to low levels in leaf and siliques. {ECO:0000269|PubMed:8972846}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Binds to a 5'-CGTTGACCGAG-3' consensus core sequence which contains a W box, a frequently occurring elicitor-responsive cis-acting element. {ECO:0000269|PubMed:8972846}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid (SA). {ECO:0000269|PubMed:17264121}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GQ377422 | 0.0 | GQ377422.1 (Populus tomentosa x P. bolleana) x P. tomentosa WRKY transcription factor 2 mRNA, complete cds. |