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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.002G193000.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
WRKY |
Protein Properties |
Length: 318aa MW: 35402.5 Da PI: 7.2135 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.002G193000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 108.5 | 3.2e-34 | 158 | 215 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s+fprsYYrCt+a+C+vkk+vers +dp+vv++tYeg+H+h+
Potri.002G193000.1 158 EDGYRWRKYGQKAVKNSPFPRSYYRCTTASCNVKKRVERSFSDPSVVVTTYEGQHTHP 215
8********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009624 | Biological Process | response to nematode |
GO:0009733 | Biological Process | response to auxin |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MERKEAVKVE NFVGSPTFSS TTDHVQTSYP FMQGFDFVDD KSSLGFMELL GVQDFSPSLL 60 DMMQVQIPSV QTPSAQVATE VVDSPPEVLN QPATPNSSSI SSASSEGLND EPANKGVDNE 120 VEEQGKTKKE LKPKKTNQKR QREPRFAFMT KSEVDHLEDG YRWRKYGQKA VKNSPFPRSY 180 YRCTTASCNV KKRVERSFSD PSVVVTTYEG QHTHPSPVMP RPNFTGSTSD SGFSSTAAFA 240 MPMQRRLSLY QQHQSQQQPP FPLVSLSPLG FGYNGSTTNA ANYLQYEKRF YTSPGSALLK 300 DHGLLQDLVP SHMLKEE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GQ377433 | 0.0 | GQ377433.1 (Populus tomentosa x P. bolleana) x P. tomentosa WRKY transcription factor 13 mRNA, complete cds. |