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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.002G168700.1 |
Common Name | POPTR_0002s17010g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
WRKY |
Protein Properties |
Length: 364aa MW: 40939.2 Da PI: 6.1384 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.002G168700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 88.4 | 6e-28 | 128 | 189 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
ldDg++WrKYGqK++ g++fpr+YYrCt++ gC ++k+v+rs+e+ +++e+tY+g+H+++
Potri.002G168700.1 128 LDDGHSWRKYGQKDILGANFPRGYYRCTHRhsqGCLATKQVQRSDENHSIFEVTYRGRHTCK 189
59***************************98999**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0048527 | Biological Process | lateral root development |
GO:0005730 | Cellular Component | nucleolus |
GO:0000987 | Molecular Function | core promoter proximal region sequence-specific DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MEKSMEWEQK TLVSELAQGK ELAKQLRNHL NPSSSLEARQ SLVEKILSSY EKALSVLNRG 60 ALVADQPKPT IGIMESPHSF SNSSPWSEVS DQDCKEEWNK DVNKKRKTQP RRTEQVKVCP 120 GTGLEGPLDD GHSWRKYGQK DILGANFPRG YYRCTHRHSQ GCLATKQVQR SDENHSIFEV 180 TYRGRHTCKQ ASTPPVASPS LENDFSKQSK YHSQQQHEEK PKPSKEISRH FGFDCNQVKN 240 EDLGSKDGIF PFFSFPCTSS GNENEENNIF TESMIENSFL GNFSPTFISS TTSESNYFSV 300 SPCHMNSFGI GSQNVQTQGC ELTTEKISAP TSVTNSPIRD LDISIDYVDF DTTFPFDNPE 360 FFA*
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