PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Potri.002G115900.1 | ||||||||
Common Name | POPTR_0002s11660g | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | bZIP | ||||||||
Protein Properties | Length: 148aa MW: 17050.4 Da PI: 10.8003 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33 | 1.3e-10 | 55 | 106 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r rr+ +NRe+ArrsR RKk +e L++ L+ N++Lk++l ++ +++ Potri.002G115900.1 55 RRRRRMLSNRESARRSRWRKKRHLEDLTQQLNRLKIVNRELKNRLGSILNQS 106 789****************************************999887765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-10 | 51 | 115 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.5E-8 | 53 | 105 | No hit | No description |
PROSITE profile | PS50217 | 10.415 | 53 | 116 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-10 | 55 | 107 | No hit | No description |
Pfam | PF00170 | 8.7E-9 | 55 | 108 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 58 | 73 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.34E-12 | 60 | 107 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence Send to blast |
MSFAQEAVQF ECPVQGPGFT DNEIQELLSL LRSPSPGQNS GSSGSNQALY SLDERRRRRM 60 LSNRESARRS RWRKKRHLED LTQQLNRLKI VNRELKNRLG SILNQSHVLW RENDRLMLES 120 IALKSRLSDL CYVFAAMQKS QQQCSSL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 56 | 75 | RRRMLSNRESARRSRWRKKR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Potri.002G115900.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010999906.1 | 8e-77 | PREDICTED: basic leucine zipper 43 | ||||
TrEMBL | A0A2K2BHF7 | 1e-101 | A0A2K2BHF7_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0002s11660.1 | 2e-97 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5996 | 30 | 52 | Representative plant | OGRP11732 | 4 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59530.1 | 2e-11 | basic leucine-zipper 4 |
Link Out ? help Back to Top | |
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Phytozome | Potri.002G115900.1 |
Entrez Gene | 7472642 |