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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.002G101900.1 |
Common Name | POPTR_0002s10230g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
bHLH |
Protein Properties |
Length: 327aa MW: 36715.4 Da PI: 5.6734 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.002G101900.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 41 | 3.3e-13 | 128 | 179 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+
Potri.002G101900.1 128 QRMTHIAVERNRRKQMNEYLAVLRSLMPPS---YVQRGDQASIIGGAINFVKELE 179
79****************************...9******************995 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MELEAIVYSQ DPFTYGCKDS YSLAGGGAWG YDFDQLQEDD KAFLGILENN NMEQQGLHAS 60 WDSSSLSLMQ QEKEWDHNSS SPGTCNVDQS LQGILFPAIM EPAPVTTTNR RKRRRTKSSK 120 NKEEIESQRM THIAVERNRR KQMNEYLAVL RSLMPPSYVQ RGDQASIIGG AINFVKELEQ 180 LLQTMGTNKK NKQQPDDNGF PSRLFAEFFT FPQYSTRASQ PSVTADESVA DQNQRALGDI 240 EVTMVESHAN LKILSKKRPG QLLKLMVGLQ NLRLSILHLN VTTVDQMVLY SVSVKVEEGC 300 HLNTVDEIAA AVNHMLYRIE EATAFS*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 110 | 114 | RKRRR |
2 | 110 | 115 | RKRRRT |
3 | 128 | 139 | RMTHIAVERNRR |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}. |