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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.002G065600.1 |
Common Name | POPTR_0002s06620g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 458aa MW: 49411 Da PI: 6.5927 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.002G065600.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63 | 6.3e-20 | 218 | 267 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a++ a+++++g
Potri.002G065600.1 218 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDDAALRFRG 267
7********.**********7.....337*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 458 aa
Download sequence Send
to blast |
MYILKVANQR GDPGEYTRYP ATDNYDNQEE RSYTAPQILS QLNQPVEHHV EVTQSPHMFM 60 GYSSSTEMSM VSELTHVVSG QRGSTSDWGS YGAVGLGGAT ITSNFGQAAP GSNTSTPASP 120 PLSAYSSTSG SGLWIGQKRG REEEAGAAAQ LMESLPRVYR GFNDFRSSQG DSSSSGATAT 180 EEVSASTIVI PTTTTPSTTA TPSSEIASLE ETGEQRRRYR GVRQRPWGKW AAEIRDPHKA 240 ARVWLGTFDT AEAAARAYDD AALRFRGNRA KLNFPENVRL LPAQTQNVTA SQVPISHSQL 300 SSHLQLQPIS SPRQQAQRPQ APAPALFQSQ ADIIRDYWEY SQLLQSSGEF HHHQQQQQQQ 360 QQPSSLLQPM FYNPQVASLQ SSALTSLSSS TSVSSLAAIS SGSSPSTFSP SASSFPLLFA 420 GQQLGYFRPP QNQNPASGSD FPVPPWTDSS HNPSSSG*
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