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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Potri.002G031900.1 |
| Common Name | POPTR_0002s03330g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
bZIP |
| Protein Properties |
Length: 157aa MW: 17854 Da PI: 6.6845 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.002G031900.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 41.4 | 3.1e-13 | 29 | 87 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
++ +r+ +NRe+ArrsR RK++++ L v++L + N + +++ +++ ++++e+
Potri.002G031900.1 29 RKRKRMLSNRESARRSRMRKQKYLGDLMAQVAQLRTDNNQILTTINVTTQHFLNVEAEN 87
67899***********************************9999998888877777665 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 157 aa
Download sequence Send
to blast |
MASSSGNSSG STQLQNSGSE EQVVLVDQRK RKRMLSNRES ARRSRMRKQK YLGDLMAQVA 60
QLRTDNNQIL TTINVTTQHF LNVEAENSIL RAQMMELNHR LDSLNEILNY INTSNGIFEI 120
DHHEDLQTSA DHGFMNPLNL IYLNQPIMAS PDLFQY*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 28 | 49 | RKRKRMLSNRESARRSRMRKQK |
| 2 | 41 | 48 | RRSRMRKQ |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in the micropylar endosperm and radicle tip in early germinating seeds. {ECO:0000269|PubMed:23461773}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}. |
