 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.002G029400.1 |
Common Name | POPTR_0002s03090g |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
Family |
ERF |
Protein Properties |
Length: 241aa MW: 26478.6 Da PI: 5.3596 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.002G029400.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.9 | 3e-19 | 40 | 89 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
ykGVr++ +g+WvAeIr+p + r +r +lg+++t eAa a++aa++kl+g
Potri.002G029400.1 40 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTYDTSHEAAMAYDAAARKLYG 89
69****999.**********8...3.35*************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 241 aa
Download sequence Send
to blast |
MSKSIMSGFG EKKQFKKPEQ ASSRKGCMRG KGGPENALCT YKGVRQRTWG KWVAEIREPN 60 RGARLWLGTY DTSHEAAMAY DAAARKLYGP EAKLNLPELQ VNSSQFPASP ANSQVIQMTN 120 QPSHLIQNSS PTSTYSSNIP NMESNEAKPI LYNHNPIMSF SNESVDSNGM EVENDANFGR 180 SGDVIKEFSA NLNVNMTFND SIWAEAALSI NFPVMDDPGI FASNLMEESG GDTMQTPWCM 240 *
|