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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.001G094800.1 |
Common Name | POPTR_0001s10300g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 348aa MW: 38312.3 Da PI: 5.1577 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.001G094800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.9 | 3e-19 | 128 | 178 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ +l+g
Potri.001G094800.1 128 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 178
59********.**********72....45*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0042991 | Biological Process | transcription factor import into nucleus |
GO:0048364 | Biological Process | root development |
GO:0048825 | Biological Process | cotyledon development |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042802 | Molecular Function | identical protein binding |
Sequence ? help Back to Top |
Protein Sequence Length: 348 aa
Download sequence Send
to blast |
MDHPVKFSEH RNQTKLTTSF LSNPVQHSKP PKIVRISVTD TYATDSSSDE ENEVAAGSSH 60 KRHVTRVKKF VNEISIEPPS SSRSADCVPV DTVLGTKPSR SARKKVGDNG SRTRRFPSKA 120 TATVVVGKKF RGVRQRPWGK WAAEIRDPLR RVRLWLGTYD TAEEAAMVYD NAAIQLRGPD 180 ALTNFVTPPA RCSPLAATSG YISGDESNSN YNINNDGVVN VSSPISVLRF SEEAETQSAS 240 SSREIRDTGT EVPEVKEDSC VSENLSDFSE YNSSIDSLFP PTTDICELRS SMRNIFEETS 300 FAAGGFLKDD DFRDMDLDFG FGLSSWNVQD HFQDIGDLFG SDSLIAF*
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