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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.001G092400.2 |
Common Name | POPTR_0001s10540g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 276aa MW: 30736.6 Da PI: 9.8068 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.001G092400.2 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.3 | 4.5e-19 | 107 | 157 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+WvAeIr p + r r++lg+++tae Aa a+++a+ kl+ge
Potri.001G092400.2 107 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 157
59******9.**********954...5**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 276 aa
Download sequence Send
to blast |
MERMQENNFS FAFNNTTDIG SSLSQLILAG GTNTLDSIFS YCQAASTLTS PAFEPLGSSV 60 YLRQRDLLQK FSEENRTNTS FSHNWLTNPL QNPGHTSNYL APIKKKLYRG VRQRHWGKWV 120 AEIRLPQNRM RVWLGTYDTA EAAAYAYDRA AYKLRGEYAR LNFPNLKDPT ELGFKDCTRL 180 DVLKSTVDAK IQAICQKVKK ERAKKNAGKK SNVNGKSTES QKPVKVDSNS STPSPSSSSS 240 SSPPPPPLLS GNNWGCSELV MPSYDPELIW EVLAN*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |