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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.001G069300.1 |
Common Name | POPTR_0001s12820g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 294aa MW: 32119.8 Da PI: 4.4362 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.001G069300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60 | 5.4e-19 | 38 | 86 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ GVr+++ +gr++AeIrdps+ + r++lg+f+taeeAa a+++a+++++g
Potri.001G069300.1 38 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 86
67******.**********965...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MDFTYSTKTN SSPSPSKTKR KQQQQQQQNQ QEQQEVRFLG VRRRPWGRYA AEIRDPSTKE 60 RHWLGTFDTA EEAALAYDRA ARSMRGSKAR TNFVYSDMPP ASSVTCIISP DESQHDNSAL 120 FAPPPQHNTH QNDTNCQQLY FSQDQQPFNA HAYGNSNSNW LAGGAGWVQG FGAGAGDGPC 180 GSYEPNSAGS LDVASGLNYL SNTDNIELPP LPPDVNSSCY GCDMGREFWN DTGFLGFQEE 240 QLDDVNGLEV SGSILGFDSN EFGLHGSLFG IVPSVSNTVT DGFDLGSSST FYF*
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