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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.001G048200.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
ERF |
Protein Properties |
Length: 221aa MW: 24837.9 Da PI: 7.953 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.001G048200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.5 | 1.7e-18 | 46 | 94 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
+y+GVr+++ +g+Wv+eIr+p +r++lg+f tae+Aa+a+++a++ +
Potri.001G048200.1 46 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAARLMC 94
69******9.**********8.....334**********************8775 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 221 aa
Download sequence Send
to blast |
MTPPLPIPLL KLLQSSLSEH FTNTYQTSRS FETFLFSITM TRPQQRYRGV RQRHWGSWVS 60 EIRHPLLKTR IWLGTFETAE DAARAYDEAA RLMCGPKSRT NFPYNPNEPQ SSSSKLLSAT 120 LAAKLHKCHM ASLQATKKNV TKQSYEAQCK KTFDTSHGIA GETVETGSKW QEGNWAGEDS 180 QVGNGDHQQH FKSLEAHHIE QMIEELLDCG SMEFCSAGST *
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC208091 | 0.0 | AC208091.1 Populus trichocarpa clone JGIACSB09-D10, complete sequence. |