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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Potri.001G002400.2 |
Common Name | POPTR_0001s03970g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
WRKY |
Protein Properties |
Length: 132aa MW: 15021.3 Da PI: 7.627 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.001G002400.2 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 48.3 | 2e-15 | 36 | 87 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dg++W+KYGqK +k+ + +rC ++C++kk+ e s+ p+ + i+Yeg+H h
Potri.001G002400.2 36 EDGFEWKKYGQKFIKNI----GKFRCQKRNCMAKKRAEWSN--PENLRIVYEGSHSHA 87
7**************96....459**************998..**************6 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 132 aa
Download sequence Send
to blast |
MSEVSPTRET SMETEEDKEE QQQHTDRGRR RLVLPEDGFE WKKYGQKFIK NIGKFRCQKR 60 NCMAKKRAEW SNPENLRIVY EGSHSHASST QDSSSASSQG TPSSSAANQY NLYTQFFGNQ 120 PASSTHDQDH T*
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