PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.011G213500.1
Common NamePHAVU_011G213500g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 443aa    MW: 48486.7 Da    PI: 8.1538
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.011G213500.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.61.9e-12370415655
                         HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +++Er RR ri  ++ +L++l Pk+    +k  s +++L +AveYIk+Lq
  Phvul.011G213500.1 370 SIAERERRTRISARIKKLQDLFPKS----DKQTSTSDMLDLAVEYIKDLQ 415
                         689*********************9....788*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.91364414IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-14367429IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.85E-11368419No hitNo description
Gene3DG3DSA:4.10.280.107.4E-14369427IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.2E-11370420IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-9370415IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
MSMVYTHGVK YSQGVAKMNS EMDSNIGQQH CHQQNSGLMR YRSAPSSLLT SLVNSSSNIN  60
INNNIGCVNG ETQQQQNYPP STNSEMETMF AKLISSNDSE PLQEFEGKAV KEEAGDTVSQ  120
PPQQHNGYSF GSSPQIMYQT QQVQGFPMAN GSLRSAGNGF DGSFSAVNSM ASQNSTQTKM  180
GASTNCSNLI RQKSSPAGFF SNYSVDNALR DMASFRGCDV SNGQAITSTS GLNGTLNFSS  240
RSSSCSTRMP QIAENGNEGV EPNCVESRNL RNDNDNTKCY MPSFTTDFWD GSVISAPRTA  300
SNNCEISFST SNAMDIQDAD FGYQKVGLTH HLSLPSSSSR MATMEKLYQN QGVVPCKIRA  360
KRGFATHPRS IAERERRTRI SARIKKLQDL FPKSDKQTST SDMLDLAVEY IKDLQKQVKM  420
LADTKEKCTC TSNHKQYSRP CA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.011G213500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0991790.0BT099179.1 Soybean clone JCVI-FLGm-26J2 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007133842.10.0hypothetical protein PHAVU_011G213500g
TrEMBLV7ANN70.0V7ANN7_PHAVU; Uncharacterized protein
STRINGXP_007133842.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40053359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-37bHLH family protein