PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.011G186800.2
Common NamePHAVU_011G186800g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 324aa    MW: 36017.9 Da    PI: 9.6236
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.011G186800.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.74e-16253302555
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                         +r++r++kNRe+A rsR+RK+a++ eLe kv  Le+eN++L+k+ +e++k+
  Phvul.011G186800.2 253 RRQKRMIKNRESAARSRARKQAYTNELEHKVSRLEEENERLRKR-QEIEKM 302
                         79****************************************65.556665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.6E-16242297No hitNo description
SMARTSM003382.6E-13249317IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.611251296IPR004827Basic-leucine zipper domain
CDDcd147077.28E-24253298No hitNo description
SuperFamilySSF579591.06E-10253298No hitNo description
PfamPF001705.2E-13253297IPR004827Basic-leucine zipper domain
PROSITE patternPS000360256271IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MGTQTMGSQG GGKDSNGKQS QVQPLVRQNS MYSLTLDEVQ NQLGDLGKPL SSMNLDELLK  60
NVWTVEAGQT VGMEHEGTPQ AGQAALQRQA SLSLTGALSK KTVDEVWKDI QQNKIIEEKK  120
FRDRQPTLGE MTLEDFLVKA GVVAETSNRK NTGPVAGIDS NMVVPQFPSQ GQWIQYPPAQ  180
YQHPQQGLMQ IYMPGQGMAQ PMHMGPGASL DVSYADSQVV AMPSPLMGTM SDSHTPGRKR  240
GTPEDMMEKT VERRQKRMIK NRESAARSRA RKQAYTNELE HKVSRLEEEN ERLRKRQEIE  300
KMLPSTPPPE PKYQLRRIGS APF*
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.011G186800.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150391e-163AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007133528.10.0hypothetical protein PHAVU_011G186800g
RefseqXP_007133529.10.0hypothetical protein PHAVU_011G186800g
RefseqXP_007133530.10.0hypothetical protein PHAVU_011G186800g
SwissprotQ9LES31e-97AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLV7AKW70.0V7AKW7_PHAVU; Uncharacterized protein
STRINGXP_007133528.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.15e-86ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]