PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.011G116800.2
Common NamePHAVU_011G116800g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 330aa    MW: 37479.1 Da    PI: 5.484
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.011G116800.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.32.4e-11197247555
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                         kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L ++++ l  +
  Phvul.011G116800.2 197 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSQRVSFLDHQ 247
                         899***********************************9999998877666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.8E-15193257IPR004827Basic-leucine zipper domain
PfamPF077162.5E-10194244IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.887195247IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-13197248No hitNo description
SuperFamilySSF579591.69E-11197251No hitNo description
CDDcd147038.46E-22198248No hitNo description
PROSITE patternPS000360200215IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MAQLPPKIPN MTPNWSDFSS PHQKMPSLKT MAPNMSNQNP SWVDEFLDFS TARRGAHRRS  60
VSDSIAFLEA PMLDHHCKSR GSEGGDNENE FERFDDEQFM SMFSDEASGN NNNNNNNNTM  120
MALSSSNPST PSDHNSINDE KEIYTEKEEE QEQKQVKNES DEDESQCKQE ITQTPDDSNN  180
SNANATTFSS EKITDPKRVK RILANRQSAQ RSRVRKLQYI SELERSVTSL QAEVSVLSQR  240
VSFLDHQRLL LNVDNSGLKQ RIAALAQDKI FKDAHQEALK REIEKLRQVY HQQNKKKMDN  300
AAGSPSQSPF PSPKPRCDTD TENEQRINV*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.011G116800.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150391e-131AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007132694.10.0hypothetical protein PHAVU_011G116800g
RefseqXP_007132695.10.0hypothetical protein PHAVU_011G116800g
SwissprotQ9M2K41e-114BZP61_ARATH; Basic leucine zipper 61
TrEMBLV7AIM20.0V7AIM2_PHAVU; Uncharacterized protein
STRINGXP_007132694.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-103bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]