PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Phvul.011G116800.1 | ||||||||
Common Name | PHAVU_011G116800g | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family | bZIP | ||||||||
Protein Properties | Length: 330aa MW: 37479.1 Da PI: 5.484 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.3 | 2.4e-11 | 197 | 247 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L ++++ l + Phvul.011G116800.1 197 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSQRVSFLDHQ 247 899***********************************9999998877666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.8E-15 | 193 | 257 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 2.5E-10 | 194 | 244 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.887 | 195 | 247 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.3E-13 | 197 | 248 | No hit | No description |
SuperFamily | SSF57959 | 1.69E-11 | 197 | 251 | No hit | No description |
CDD | cd14703 | 8.46E-22 | 198 | 248 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 200 | 215 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence Send to blast |
MAQLPPKIPN MTPNWSDFSS PHQKMPSLKT MAPNMSNQNP SWVDEFLDFS TARRGAHRRS 60 VSDSIAFLEA PMLDHHCKSR GSEGGDNENE FERFDDEQFM SMFSDEASGN NNNNNNNNTM 120 MALSSSNPST PSDHNSINDE KEIYTEKEEE QEQKQVKNES DEDESQCKQE ITQTPDDSNN 180 SNANATTFSS EKITDPKRVK RILANRQSAQ RSRVRKLQYI SELERSVTSL QAEVSVLSQR 240 VSFLDHQRLL LNVDNSGLKQ RIAALAQDKI FKDAHQEALK REIEKLRQVY HQQNKKKMDN 300 AAGSPSQSPF PSPKPRCDTD TENEQRINV* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Phvul.011G116800.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015039 | 1e-131 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007132694.1 | 0.0 | hypothetical protein PHAVU_011G116800g | ||||
Refseq | XP_007132695.1 | 0.0 | hypothetical protein PHAVU_011G116800g | ||||
Swissprot | Q9M2K4 | 1e-114 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | V7AIM2 | 0.0 | V7AIM2_PHAVU; Uncharacterized protein | ||||
STRING | XP_007132694.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2011 | 34 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 1e-103 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Phvul.011G116800.1 |
Entrez Gene | 18615893 |
Publications ? help Back to Top | |||
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