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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.011G063300.1 |
Common Name | PHAVU_011G063300g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
GRAS |
Protein Properties |
Length: 747aa MW: 84535.9 Da PI: 6.0931 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.011G063300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 368.9 | 6.7e-113 | 372 | 742 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
l++lLl cA+avss+d a++lL++++++ sp gd +qRla++f++AL+arla++++++y al+ ++ts ++ ++a++++ ++P+
Phvul.011G063300.1 372 LRTLLLLCAQAVSSDDRVSANELLKQIRQHTSPLGDGTQRLAHCFANALEARLAGTGTQIYTALSHKRTS---AADMVKAYQMYISACPFK 459
5789************************************************************999999...99**************** PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
k+s + aN++Il+ + + e +HiiDf+i +G+QWpaL+ L++R +gpp+lRiTg++ p++g +e++++tg rLa+++++++vpfefn+
Phvul.011G063300.1 460 KLSIIFANHTILQLAMEVESLHIIDFGIRYGFQWPALIYRLSKRLGGPPKLRITGIELPQPGfrPAERVQQTGLRLARYCDRFKVPFEFNA 550
*************************************************************9***************************** PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
+a+++e++++e+L++k++E laVn++++ ++llde+ l+s+rd+vL+l+++ +P+++++ + ++n++ F+ rf eal +ys+lfd l
Phvul.011G063300.1 551 -IAQKWETIKIEDLKIKENELLAVNSMFRFQNLLDETIVLNSPRDAVLNLIRKANPTIFIHGTVNGSYNAPFFVPRFREALFHYSTLFDVL 640
.7***************************************************************************************** PP
GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgW 362
+++++re+ r + E+e++gr+++n++aceg er+er e +++W+ r ++aGF+++pl+++ ++ ++ l+ v+ +++ e+ + +++gW
Phvul.011G063300.1 641 DTNVSREDPMRLMFEKEFFGRRVMNALACEGCERVERPEIYKQWQVRNMRAGFRQLPLDKHLINKLRYKLKDVYHSDFMLLEDANFMLQGW 731
**************************************************************************777************** PP
GRAS 363 kdrpLvsvSaW 373
k+r +++ S+W
Phvul.011G063300.1 732 KGRVVYASSCW 742
*********** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 747 aa
Download sequence Send
to blast |
MDPRFKSNFI NGFEPNQVPN TVVVEDQFLV PVNGMMRSFE FGFRDNPLVL PPDPNVAQNH 60 VSFATDEESP LDEIDFSVTV LRYINQMLME EDLEEKSCMF HDSLALQAAE KSFYEVIGET 120 HPSSIKTYHD VDSPEDSSFS DYGSGGTATS TGNSIESHGN NVDLTDYKPS IPQTTFPTDF 180 VFQASSIHSY MNTTRNFGVT DSGFLASSTA AGFLDPTLFS KSESVLQFER GVEEANKFLP 240 KGNPLVIDLD NPSFRKVPPL QEETKVERDE IYAESRGRKN HEREDEEADL HDGRSNKQSA 300 VYIDDSEISE LLDKVLLGTR CRNDPAPLCI CYADLSNGAS LCAQKKLEET NKSGGGKSRV 360 KKQGNKKEVV DLRTLLLLCA QAVSSDDRVS ANELLKQIRQ HTSPLGDGTQ RLAHCFANAL 420 EARLAGTGTQ IYTALSHKRT SAADMVKAYQ MYISACPFKK LSIIFANHTI LQLAMEVESL 480 HIIDFGIRYG FQWPALIYRL SKRLGGPPKL RITGIELPQP GFRPAERVQQ TGLRLARYCD 540 RFKVPFEFNA IAQKWETIKI EDLKIKENEL LAVNSMFRFQ NLLDETIVLN SPRDAVLNLI 600 RKANPTIFIH GTVNGSYNAP FFVPRFREAL FHYSTLFDVL DTNVSREDPM RLMFEKEFFG 660 RRVMNALACE GCERVERPEI YKQWQVRNMR AGFRQLPLDK HLINKLRYKL KDVYHSDFML 720 LEDANFMLQG WKGRVVYASS CWVPAQ*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015039 | 0.0 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |