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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.011G063200.1 |
Common Name | PHAVU_011G063200g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
GRAS |
Protein Properties |
Length: 687aa MW: 77758.9 Da PI: 5.3811 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.011G063200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 383.5 | 2.5e-117 | 309 | 683 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
l++lLl c + v ++d++ a++lL+++++++sp gd+ qRla+yf++AL+arl++ ++ + + ++++ + +e l+a+++f +sP+
Phvul.011G063200.1 309 LRNLLLMCSQSVYANDNRTANELLKQIRQHSSPFGDASQRLAHYFANALEARLVGDGTVAQGTYSFLTSKRFSAAEFLKAYQVFLSASPFK 399
6899**************************************************96665555556666665669***************** PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
kf+++ aN++I++a++++e++HiiDf+i +G++Wp L++ L++R++gpp+lRiTg++ p++g +e++eetg+rLa+++++ +vpfe+n+
Phvul.011G063200.1 400 KFTYFFANKMIMKAAAKAETIHIIDFGILYGFHWPILIKFLSNREGGPPKLRITGIEFPQPGfrPTERIEETGSRLANYCKRYNVPFEYNA 490
*************************************************************9***************************** PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
++++++e++++e+L+++++E +aVn++++ ++lldes +++s+r++vL+l+++++P++++++ + ++n++ F++rf eal +ysa++d+
Phvul.011G063200.1 491 IASRNWETIQVEALKIQSNELVAVNCHMRFENLLDESIEVNSPRNAVLQLIRKINPDIFTHSITNGSYNAPFFATRFREALFHYSAIYDMC 581
9999*************************************************************************************** PP
GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgW 362
++ +pre+e+r ++Erellgre++nv+aceg+er er et+++W++r ++aGFk++pl+++ +++ ++ l++ + + + +e+++++++gW
Phvul.011G063200.1 582 DTVIPRENEWRLMIERELLGREAMNVIACEGSERLERPETYKQWQARNTRAGFKQLPLNKELMAKFRTKLKEWYHRDFVFDEDNNWMLQGW 672
**************************************************************************999************** PP
GRAS 363 kdrpLvsvSaW 373
k+r L++ ++W
Phvul.011G063200.1 673 KGRILYASTCW 683
*********** PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 687 aa
Download sequence Send
to blast |
MEHPNFFGED EGIAHLTDSL AFPTMDPSSR DPSLEDNDFS ETAKFISQIL MEENVEHKPF 60 YDSLTLQVTE KSFYDALAGN LLPSSNQHPL AFSPEAETTT TTTTASSSSS SNNSNNNFSD 120 ENSGELKLPS PDSVFKFNSR PLSQPSPSIT ANHGLQDLDF SIAKLLSQNI FNDVDSVSQF 180 RRGLEEASKF LPPGPNLVTG LDSNGEQGFN KFGETSYGLR SGKNHKRDER YAIEEEEEEE 240 EEGRSNKQSA LSHADESDLS DAFDRVLLHE GNMCSEISSL PGGAVKVDEP DGGKSRSRKP 300 GRNKETVDLR NLLLMCSQSV YANDNRTANE LLKQIRQHSS PFGDASQRLA HYFANALEAR 360 LVGDGTVAQG TYSFLTSKRF SAAEFLKAYQ VFLSASPFKK FTYFFANKMI MKAAAKAETI 420 HIIDFGILYG FHWPILIKFL SNREGGPPKL RITGIEFPQP GFRPTERIEE TGSRLANYCK 480 RYNVPFEYNA IASRNWETIQ VEALKIQSNE LVAVNCHMRF ENLLDESIEV NSPRNAVLQL 540 IRKINPDIFT HSITNGSYNA PFFATRFREA LFHYSAIYDM CDTVIPRENE WRLMIERELL 600 GREAMNVIAC EGSERLERPE TYKQWQARNT RAGFKQLPLN KELMAKFRTK LKEWYHRDFV 660 FDEDNNWMLQ GWKGRILYAS TCWVPA*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015039 | 0.0 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |