 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Phvul.011G063000.1 |
Common Name | PHAVU_011G063000g |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
|
Family |
GRAS |
Protein Properties |
Length: 686aa MW: 77328.5 Da PI: 6.3643 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.011G063000.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 366.1 | 4.7e-112 | 317 | 682 | 3 | 373 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93
+lL +cA+av+s d + a+++L+++++++sp gd +qRla+yf+ +L++rla ++ k + +++s ++ l+a+++++ sP++ +
Phvul.011G063000.1 317 TLLSQCAQAVASFDPRSANEILKQIRQHSSPLGDGLQRLAHYFADGLETRLAA---GTPKFMLFQSAS---AADMLKAYRVYVTSSPFHWM 401
6899************************************************9...555555555555...89****************** PP
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
s+++aN++I + ++e+ +HiiDf+is+G+QWp+L+q L++R++gpp+lRiTg++ p++g +e++eetg+rL+k+++++gvpfe+n +
Phvul.011G063000.1 402 SYFLANRTIRKLSQSESSLHIIDFGISYGFQWPCLIQGLSERTGGPPRLRITGIDLPQPGfrPAERVEETGRRLEKYCKRFGVPFEYNC-L 491
***********************************************************9*****************************.6 PP
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273
a+++e+++le+L++++ E+++Vn+ ++l++l de+v+ + +rd+vL+l+++++P+++ + + +n++ Fl+rf eal ++sal+d++ea
Phvul.011G063000.1 492 AQKWETIRLEDLKLDRSEVTVVNCLYRLKNLSDETVTANCPRDAVLRLIRRINPTIFMHGVVNGTYNAPFFLTRFREALFHFSALYDMFEA 582
******************************************************************************************* PP
GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkd 364
++pre+ r + E+ l+gr++ nv+acegaer+er et+++W+ r ++a Fk++pl ++ +k +k +++k + + ++v+e+ +++++gWk+
Phvul.011G063000.1 583 NVPREDPSRLMFEKGLFGRDAINVIACEGAERVERPETYKQWQVRNQRARFKQLPLATELVKRVKEMVKKEYHKDFTVDEDGKWVLQGWKG 673
************************************************************************888**************** PP
GRAS 365 rpLvsvSaW 373
r L+++S+W
Phvul.011G063000.1 674 RILFALSSW 682
********* PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 686 aa
Download sequence Send
to blast |
MLSMDSLLDS FPGSANGFIF ENGSDSLFMN QNRASEFKLD DSRSPSESAT DYAPSSGTSS 60 DGEHAESTKH FNPILRYISD ILMEEEDDLE RKPCMLQDCL RLQAAEKSFY DALVRSHPSS 120 PRQFNDSPDP DDNFGGTTSS ESYSSYTTDN SCESDWFNGA GDFESSFLQR SLHNSPEHAY 180 VAPDLIREAQ AGFHFSNGAW KLIQSQNKAG VVEEGVTRTG KGSREKRSHL MNDDVSHEEE 240 ERSNKLSAVY SDDSEPSSMF DEVLLCKDGK SPAVFKSDRE PSSSQSAESG GSNGKTTRSK 300 KGSNKGKSAR TTVDLWTLLS QCAQAVASFD PRSANEILKQ IRQHSSPLGD GLQRLAHYFA 360 DGLETRLAAG TPKFMLFQSA SAADMLKAYR VYVTSSPFHW MSYFLANRTI RKLSQSESSL 420 HIIDFGISYG FQWPCLIQGL SERTGGPPRL RITGIDLPQP GFRPAERVEE TGRRLEKYCK 480 RFGVPFEYNC LAQKWETIRL EDLKLDRSEV TVVNCLYRLK NLSDETVTAN CPRDAVLRLI 540 RRINPTIFMH GVVNGTYNAP FFLTRFREAL FHFSALYDMF EANVPREDPS RLMFEKGLFG 600 RDAINVIACE GAERVERPET YKQWQVRNQR ARFKQLPLAT ELVKRVKEMV KKEYHKDFTV 660 DEDGKWVLQG WKGRILFALS SWVSA*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015039 | 0.0 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |