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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.011G061500.1 |
Common Name | PHAVU_011G061500g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
C2H2 |
Protein Properties |
Length: 176aa MW: 19372.9 Da PI: 4.8961 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.011G061500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 15 | 7e-05 | 31 | 53 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C++ Fs+ L H++ H
Phvul.011G061500.1 31 YECNFCKRGFSNAQALGGHMNIH 53
99*******************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0051973 | Biological Process | positive regulation of telomerase activity |
GO:0003676 | Molecular Function | nucleic acid binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 176 aa
Download sequence Send
to blast |
MESDHDHQAA ISENPSDGED QGATHVTSRS YECNFCKRGF SNAQALGGHM NIHRKDKAKL 60 KQQQSSNQTQ VQPSLDKVVP PQDQTKSGEE RNAPKWNWNV SQEEHVLSSG ATHTRQLPLF 120 EESPTSSETL NPQGQNTTEG ALLSTRDSSL ELDLELRLGP EPQDSSAETG TRNFF*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015039 | 0.0 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |