PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.011G053500.1
Common NamePHAVU_011G053500g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 338aa    MW: 37849.9 Da    PI: 6.7122
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.011G053500.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.63.7e-10154211562
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                         kr++r   NR +A rs +RK  +i eLe+kv++L++e ++L  +l  l+     l +e
  Phvul.011G053500.1 154 KRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEATSLSAQLTLLQRDTNGLNAE 211
                         9*******************************************99998877666655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.2E-15150214IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.841152215IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.15E-11154205No hitNo description
PfamPF001705.0E-9154208IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.5E-11154208No hitNo description
CDDcd147031.37E-24155204No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MDRDRDNKSP PLPPSSSSSQ PFSHDIVGMP DNPPKNRGHR RAHSEIITLP DDLTFDTDLA  60
LDDDFLALVD HLNSPPLPED NNKNIGNNNN YSSSNNDYGV ATERPRVRHQ HSHSMDLSIQ  120
PDMLISGADD VAGLDAKKAM SADKLAELAL IDPKRAKRIW ANRQSAARSK ERKMRYISEL  180
ERKVQTLQTE ATSLSAQLTL LQRDTNGLNA ENGELKLRLQ TMEQQVHLQD ALNDALKEEI  240
QHLKLMTGQA IPNGGSTNFA SFGGGQQFYP NNHAMYTLLA AQKFQQLQIQ SQKQQQHQLQ  300
QQQQQFQQHQ LQHQLQQQQQ KQTTATSTVT STNGALE*
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.011G053500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150391e-172AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007131939.10.0hypothetical protein PHAVU_011G053500g
SwissprotQ040881e-111POF21_ARATH; Probable transcription factor PosF21
TrEMBLV7AGE90.0V7AGE9_PHAVU; Uncharacterized protein
STRINGXP_007131939.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55173249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-101bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]