PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.011G044800.1
Common NamePHAVU_011G044800g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 391aa    MW: 43045.1 Da    PI: 7.835
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.011G044800.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.4e-10196243455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Phvul.011G044800.1 196 SHSLAERVRREKISERMKYLQDLVPGC----NKIAGKAGMLDEIINYVQSLQ 243
                         8**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.50E-9190247No hitNo description
SuperFamilySSF474599.95E-17190262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-17192263IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.364192242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.2E-7196243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-9198248IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MLHCLNGSGN LGASCSDMTV LERQREATIK WQHHHHDNHH PYFSATEFHV NLVFSSSPNN  60
LPQSQGSLMA RDDSALAQVL AHSLKPDPAL CPELDSGFGS SSVILPKESN KKRKAQNFKI  120
AAESDNKDKR VKVSGEEGES RVTHQSSNRN GKSNAVKNNR ETSADSSKDD SKASEVQNQK  180
REYIHVRARR GQATDSHSLA ERVRREKISE RMKYLQDLVP GCNKIAGKAG MLDEIINYVQ  240
SLQRQVEFLS MKLAAVNPSI DELFAREVFP SLSQGLPNIG MASDMRMCNN PSYLQLNPTQ  300
PHGSCCGGLI NNVGISPPNM GLRRNISTTH VPLSEAFLDS SCFTQILPSS NWEGDFQSLY  360
NVAFDQGRAT SFPSQPFTGA VESSNPKMEM *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105113PKESNKKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.011G044800.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007131827.10.0hypothetical protein PHAVU_011G044800g
TrEMBLV7AIA30.0V7AIA3_PHAVU; Uncharacterized protein
STRINGXP_007131827.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36183463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.12e-56cryptochrome-interacting basic-helix-loop-helix 1