PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.011G026500.1
Common NamePHAVU_011G026500g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 277aa    MW: 30885.4 Da    PI: 5.866
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.011G026500.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.11.4e-07756154
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                        r++ +  rE+ RRdr+N+ f  L  +l ++     +K++Ka+i   +++ +++L
  Phvul.011G026500.1  7 RKTQKADREKLRRDRLNEQFVVLGNILDPD----RPKNDKATIIGDTIQLLQDL 56
                        6788999********************997....79************999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.103.9E-11677IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-12674IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.03656IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-5756IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.74E-5761No hitNo description
SMARTSM003536.5E-51262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MDCTAARKTQ KADREKLRRD RLNEQFVVLG NILDPDRPKN DKATIIGDTI QLLQDLTSQV  60
SKLKDEYTTL NEESCELARE KNDLREEKAS LKSDIEKLNC QYQQQLRTVS PWTAMDHSVM  120
VAPPSYPYPV PMPLPPAPIT MQPYPFYANQ HSAIIPNPCS SYVPYLVPNT LVEQQSIQHI  180
APPLHPGFQS HMSGKQESRN KSKESMVEKH EDSNDVTADQ TPESSSDQDL SSGQRKSSEL  240
PRKQSSCNEA SSLGWCSSSS SVQESSSSSV VHEHKG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.011G026500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007131595.10.0hypothetical protein PHAVU_011G026500g
SwissprotQ9LT239e-78BH121_ARATH; Transcription factor bHLH121
TrEMBLV7ADL40.0V7ADL4_PHAVU; Uncharacterized protein
STRINGXP_007131595.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22823376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.17e-76bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]