PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.010G158500.1
Common NamePHAVU_010G158500g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 303aa    MW: 33577.7 Da    PI: 5.6485
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.010G158500.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.34.9e-12126171555
                         HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         h ++ErrRR+++ ++f  L   +P +      K +Ka++L+ A++Y+k+L+
  Phvul.010G158500.1 126 HIMAERRRRQELSERFIALSATIPGL-----NKTDKASVLRAAIDYVKQLK 171
                         999**********************8.....6*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.75E-17120191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.624121170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-17126187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-9126170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.49E-12126175No hitNo description
SMARTSM003533.3E-15127176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MEEDSCNNNN SHLHMEMDFF DNNDFDDFFS DIILHQTPPP TPFSSGSESD HSFPASSFLP  60
NAAAKRSSPR TYILSFDNST VVPATPEPSV PSSPLPAKRA LNAQNPKTRP NQGSKRTRTS  120
SQTIDHIMAE RRRRQELSER FIALSATIPG LNKTDKASVL RAAIDYVKQL KEKVQELEKE  180
SRKSAEETVI LVNKSNPNGN EEITNSSTET NCSILPEMKA RVLGKEVLIE IHCEKEYGVE  240
IKILDHLENL HLCVTGSSVL PFGNSALCIT ITAQMDEQCQ MTVNEVVKNL KQSALSVSFG  300
ER*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.010G158500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-113AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007135789.10.0hypothetical protein PHAVU_010G158500g
TrEMBLV7AT620.0V7AT62_PHAVU; Uncharacterized protein
STRINGXP_007135789.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131101230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.23e-37bHLH family protein