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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.010G138500.1 |
Common Name | PHAVU_010G138500g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
LBD |
Protein Properties |
Length: 329aa MW: 36748.8 Da PI: 5.7705 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.010G138500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 126 | 1.8e-39 | 50 | 149 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
aCaaCk++rrkCa+dC+lapyfp++++++f n+hklFG+sn++k++k ++++++++a+++++y++++ra dPv G+++ il+lq q+e +
Phvul.010G138500.1 50 ACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKVVSPHDKDQAVRTIIYQSDMRATDPVGGCYRYILDLQAQIEYCR 140
7****************************************************************************************** PP
DUF260 92 aelallkee 100
ael+l+ ++
Phvul.010G138500.1 141 AELELVLQQ 149
***998776 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MQPKSRFFVP PQKAVNNNNN SNTTTTTPTS STTTNNRIST TRNGNSTTQA CAACKYQRRK 60 CAPDCILAPY FPHDRQRQFL NAHKLFGVSN ITKIIKVVSP HDKDQAVRTI IYQSDMRATD 120 PVGGCYRYIL DLQAQIEYCR AELELVLQQL AMFRAQAQNQ HQYQQQHGMY APNNVNVAVN 180 GDGEVLNADP MGLYSQQQYQ CLQPHQQEQY VMMHENGSQN CNGATPLQEQ INTWAVQNTA 240 VSLSSLSLQG QSSNVSDEYD HKPVIDIDSD ERSELGFESE ELVHRSDEAV LFKIDDAVIK 300 AEGECMQQAQ DHDLKGAATS FSLTNCTC*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015042 | 0.0 | AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari. |