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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.010G124700.1 |
Common Name | PHAVU_010G124700g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
ERF |
Protein Properties |
Length: 385aa MW: 42688.3 Da PI: 4.6131 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.010G124700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.1 | 2.1e-18 | 116 | 165 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a++ +++++g
Phvul.010G124700.1 116 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFSTAEEAARAYDTEARRIRG 165
69*******.**********954...4************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 385 aa
Download sequence Send
to blast |
MCGGAIISDF IPAGPAGRSR RVTADILWPN LRKRFSKPLL DDDFEAGFRE FKDDSEIEDD 60 DDEDEEDLMV IGVKKPFGFT RPNKTSKSLS RASSTVNSVE SKGQAEESAK RKRKNQYRGI 120 RQRPWGKWAA EIRDPRKGVR VWLGTFSTAE EAARAYDTEA RRIRGKKAKV NFPDEPSAAS 180 SKRLKVNPEA QPLKGKLNSV KPKMNQMFNF GDYLEDYYSS VDQVEQKPLV NQYVNPGPFT 240 GNGVQLSPVT PSADVIAYFS SEHSSNSFDY SDLGWGEQVS KTPEISSMLS APLEGESQFV 300 QGADQIQRND TQDMLSVQDD SAKTLSEELA DIESQLKFFE TPLFDGSWTE ASLASLLGTD 360 ATQDAGNPLN LWSFDDLPSM AGVF*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1gcc_A | 5e-21 | 116 | 173 | 2 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
5wx9_A | 6e-21 | 115 | 181 | 13 | 80 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JN416602 | 0.0 | JN416602.1 Glycine max cultivar Jilin 32 ethylene-responsive transcription factor 7 (ERF7) mRNA, complete cds. |