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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Phvul.010G117200.1 |
| Common Name | PHAVU_010G117200g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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| Family |
HD-ZIP |
| Protein Properties |
Length: 310aa MW: 35574.4 Da PI: 6.5161 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.010G117200.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58 | 1.6e-18 | 104 | 155 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
++f+++q++ Le++Fe ++ + +++ +LA+ lgL+ rqV +WFqN+Ra++k
Phvul.010G117200.1 104 RRFSDDQIKSLETMFETESRLEPRKKLQLARDLGLQPRQVAIWFQNKRARWK 155
48*************************************************9 PP
|
| 2 | HD-ZIP_I/II | 118.7 | 3.1e-38 | 103 | 193 | 3 | 93 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
rr+s++q+k+LE++Fe+e++Lep++K +lar+Lglqprqva+WFqn+RAR+k+kqlE+dy L+++y++l+++ ++L+ke+++L +l++
Phvul.010G117200.1 103 TRRFSDDQIKSLETMFETESRLEPRKKLQLARDLGLQPRQVAIWFQNKRARWKSKQLERDYGILQSNYNSLASRFDALKKEKQTLLIQLQK 193
79***********************************************************************************999886 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009738 | Biological Process | abscisic acid-activated signaling pathway |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MSFGYKAINW GLHSDHHDRN SNKQKPIDTC ISQNTHTHSL SKKNLLSPNS PILNSKPFSL 60
SKQQVRVLHN MEYTYSAEAE TYTSSSTTPS SAMRSKKKAN NNTRRFSDDQ IKSLETMFET 120
ESRLEPRKKL QLARDLGLQP RQVAIWFQNK RARWKSKQLE RDYGILQSNY NSLASRFDAL 180
KKEKQTLLIQ LQKLNHLMQK PLEPGQSRTQ DEAANSMDSE SENGGTMKCE HEEKPSPTME 240
RSEHVHGVLS DDDASIKVED FGLEDEHDLM NFVEHADDSL TSPEDWSAFE SNGLLGQTTS 300
DYQWWDFWS*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription activator that may act as growth regulators in response to water deficit. {ECO:0000269|PubMed:15604708, ECO:0000269|PubMed:8771791}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By water deficit, by abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682, ECO:0000269|PubMed:8771791}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KT031175 | 0.0 | KT031175.1 Glycine max clone HN_WYQ_3 homeodomain/HOMEOBOX transcription factor (Glyma07g05800.1) mRNA, partial cds. |
