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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.010G115600.1 |
Common Name | PHAVU_010G115600g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
Dof |
Protein Properties |
Length: 283aa MW: 30649.1 Da PI: 8.9957 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.010G115600.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 126.3 | 9.3e-40 | 20 | 80 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknkk+s
Phvul.010G115600.1 20 PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVS 80
6899******************************************************987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 283 aa
Download sequence Send
to blast |
MEGMTPNSCS RLVLEKKARP QEQLNCPRCN STNTKFCYYN NYSLTQPRYF CKTCRRYWTE 60 GGSLRNVPVG GGSRKNKKVS SGAGATASSS SSPKVPDLNP PNLSVSVSAL SSQNPKIIHG 120 GQDLNLAFPA MDKYHHGISP YVEMQNSDTT THHQNSTSCS APPTTLSALE LLRSSMASRG 180 LNPYAPSSLM PNSANNNALY PSGFPMQEVK PSLSFSSVDG MGNRSYDHHV QERGGRVLFP 240 FGDVNKQLSA AGSAEVEHNK EQQQQQGNST GYWSGMIGEG TW*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor specifically involved in the maternal control of seed germination. Regulates transcription by binding to a 5'-AA[AG]G-3' consensus core sequence. May ensure the activation of a component that would trigger germination as a consequence of red light perception. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015042 | 0.0 | AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari. |