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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Phvul.010G050500.1 |
| Common Name | PHAVU_010G050500g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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| Family |
ERF |
| Protein Properties |
Length: 218aa MW: 23746.4 Da PI: 6.2892 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.010G050500.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 56.5 | 6.7e-18 | 107 | 156 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+++AeIrd + ng r++lg++ +ae+Aa a+++a+ k++g
Phvul.010G050500.1 107 YRGVRRRP-WGKYAAEIRDaKR-NG--GRVWLGTYESAEDAALAYDRAAFKMHG 156
9*******.**********443.43..9*************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 218 aa
Download sequence Send
to blast |
MNPHASNTNE NVLDLSELPA TTLFSRSSSF RSIFFAENWA ELPLKENDAD DMVIFGALRE 60
AAATTGWFPA NGNGVSNAAV KIENEGQSSD TNAASGIQPP PVKGLSYRGV RRRPWGKYAA 120
EIRDAKRNGG RVWLGTYESA EDAALAYDRA AFKMHGSKAK LNFPHLIGSD DAELIRVTSK 180
KRSLEVLSSN LSSSLVTAKR SKDNSFVDSE MNDLDMW*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. {ECO:0000269|PubMed:11950980}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Strongly induced by wounding. Induced by Pseudomonas syringae tomato (both virulent and avirulent avrRpt2 strains), independently of PAD4. Also induced by methyl jasmonate (MeJA) independently of JAR1, but seems to not be affected by ethylene. Induction by salicylic acid (SA) is controlled by growth and/or developmental conditions, and seems to be more efficient and independent of PAD4 in older plants. {ECO:0000269|PubMed:11950980, ECO:0000269|PubMed:12068110}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015042 | 1e-169 | AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT2G44840.1 | 3e-42 | ethylene-responsive element binding factor 13 |
