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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Phvul.010G018700.1 |
| Common Name | PHAVU_010G018700g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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| Family |
Trihelix |
| Protein Properties |
Length: 261aa MW: 30096.1 Da PI: 7.5462 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.010G018700.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 50.9 | 4.2e-16 | 19 | 102 | 2 | 81 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergf.erspkqCkekwenlnkrykkikegekkrtsessstcpy 81
Wt+qe+ +Li+a++e++ +l+rg l+ ++Weev+ ++ + + +s+ qC++k+e+l++r++++k++ + ++y
Phvul.010G018700.1 19 WTHQETVHLIRAYQEKWYALKRGPLRHNQWEEVAVVVaarcgYDLAYpAKSALQCRHKMEKLRQRHRAEKKHVAAT--LRPAAWQY 102
*************************************8666655566678********************998774..33334655 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MATQNDAASP TKKPQPIPWT HQETVHLIRA YQEKWYALKR GPLRHNQWEE VAVVVAARCG 60
YDLAYPAKSA LQCRHKMEKL RQRHRAEKKH VAATLRPAAW QYNALMEDLE RGPLPISALA 120
PFQNDTDSDP DEDANYQNDN DGDASFVKSK SISCILSERP VRMRSGERGF LRERVEEERG 180
EDDDDDRDDV LALPAEIRAF AERFIGMESL KMEMMKETER CRLEMEKKRI QMILDSQRRI 240
VDSIGRAFGS NKRIKITQQI *
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015042 | 0.0 | AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari. |
