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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.009G195200.1 |
Common Name | PHAVU_009G195200g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 475aa MW: 52008.2 Da PI: 8.138 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.009G195200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 76.3 | 3.7e-24 | 163 | 219 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk ++ +++ ++v+ei+Y+++H h+
Phvul.009G195200.1 163 SDGYNWRKYGQKQVKSPTGSRSYYRCTHSNCCAKK-IKFCDHSGHVIEIVYKSQHSHD 219
7********************************98.999999***************7 PP
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2 | WRKY | 92.9 | 2.4e-29 | 336 | 393 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vkgs++ r+YYrCtsagCpv+k++e++ +++k+++itY+g H+h+
Phvul.009G195200.1 336 SDGYRWRKYGQKLVKGSPHFRNYYRCTSAGCPVRKHIETAVDNTKALIITYKGVHDHD 393
7********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 475 aa
Download sequence Send
to blast |
MEEEEATQQR LTDSSLTTHS LTSTASDEEL LHSETLLLHS SDLPHHNAAP DMQRSSTARE 60 IGLDESKESA QHSDEETIVK ETVEAPQKQT ENQLQMSVCS TSLSKLSPTS VSQYLSSAPG 120 PIVPEQRPSP PKANNVKVAK VDKGSPSGGT TLSSVSVTRA SASDGYNWRK YGQKQVKSPT 180 GSRSYYRCTH SNCCAKKIKF CDHSGHVIEI VYKSQHSHDP PHKIDSTKEC KFLPYSEPKM 240 KCSVPKQSSR VRNDSDPSSS PKEPLYESPC SAKRNLENSS NGEKGKVFLK EAHVNDPEPK 300 KRLNKGDDLT CLDSAIKPGK KPKFVVHAAE DMGISSDGYR WRKYGQKLVK GSPHFRNYYR 360 CTSAGCPVRK HIETAVDNTK ALIITYKGVH DHDMPVPKKR HGPPSASLVA AAAPASMNNL 420 QLKRTGLIQN QEISAQCSED TEGELTGEAL DLEGEKAIES ARTLLSIGFE IKPC*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031238 | 0.0 | KT031238.1 Glycine max clone HN_CCL_32 WRKY transcription factor (Glyma12g23950.1) mRNA, complete cds. |