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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.009G189700.1 |
Common Name | PHAVU_009G189700g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 596aa MW: 64914.9 Da PI: 6.5152 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.009G189700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 94.7 | 6.5e-30 | 242 | 300 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+Hnh+
Phvul.009G189700.1 242 NDGCQWRKYGQKISKGNPCPRAYYRCTVApSCPVRKQVQRCAQDMTILITTYEGTHNHP 300
8***************************99****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 596 aa
Download sequence Send
to blast |
MEFGSERSAQ EVKEEKRTES TLGGQEHRRQ QEIVMQEASL ATPERSLVEV GPNVSCLSKK 60 EEVDELQNAK AEMGEVIEEN QRLKMRLNRI LNDYRTLQMQ FHSITEQETK DCSDKPKNDE 120 EMREESELVS LSLGRIPIPR NNEKGKVPKT LEEEEDEEGL SLGLECKYET SKSGSTTEHV 180 PNPSPTNSVE EVPKEEAAGE SWPASKGHKT NRDVGEVEVP EQNPAKKARV CVRARCDTPT 240 LNDGCQWRKY GQKISKGNPC PRAYYRCTVA PSCPVRKQVQ RCAQDMTILI TTYEGTHNHP 300 LPLSATAMAS TTSAAASMLL SGSSTSHSGS SPSPNITTTA ADLHGIKFSL SDGSQSKQYY 360 LSHPALSSSN SHPTITLDLT SNPLSSSAPF AKFTSNSNYN PQRYPPSTSL SFSSSESNTS 420 SWSNGFFTYN TQPYNNNRNA NVNILGNINL GRQQPEQQPM ENIYSSFMQR NNNIIPPAQH 480 SLPDTIAAAT KVITADPNFQ SALAAALSSI IGSGSSQGNQ GAAENPSQKI KWGELFPPSF 540 ALPSSSKVNG CASSFLNKSP ANPQQGSLMF LQPPLPLSSP KSASGSPGDH REKKN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 0.0 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |