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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.009G186000.1 |
Common Name | PHAVU_009G186000g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
NAC |
Protein Properties |
Length: 355aa MW: 39758.8 Da PI: 8.5588 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.009G186000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 181.4 | 2.2e-56 | 16 | 142 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeel+++yL +kv+++++++ ++i evd++++ePw+Lp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke
Phvul.009G186000.1 16 LPPGFRFHPTDEELISHYLYRKVTETHFSA-RAIGEVDLNRSEPWELPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKE 105
79**************************99.89***************888999************************************* PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
+++ +++lvg+kktLvfykgrapkgektdWvmheyrle
Phvul.009G186000.1 106 IFR-GKSLVGMKKTLVFYKGRAPKGEKTDWVMHEYRLE 142
***.999*****************************85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MENVSVLCKE DLQMDLPPGF RFHPTDEELI SHYLYRKVTE THFSARAIGE VDLNRSEPWE 60 LPWKAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDKEIFRGK SLVGMKKTLV 120 FYKGRAPKGE KTDWVMHEYR LEGKFSVHNL PKTAKSEWVI CRVFQKSSGV KKTHISGIMM 180 LDSFGNELAS SALPPLTDSS PSIGNTKALS VTEQPYVPCF SNPIDVPRAI FDSLSNTNIN 240 NNNTLYGVSS NHSFYSTQGV HLPAPPTLPS PGSSNHYLIR SFLHNHGKGS HLRNGFESER 300 EMVSVSQETG VSADVNAETS SVVSHLEMSK RLYENQNNAI GSAAPADLAS LWNY*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 4e-55 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-55 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-55 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-55 | 13 | 172 | 14 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swm_B | 5e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swm_C | 5e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swm_D | 5e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swp_A | 5e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swp_B | 5e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swp_C | 5e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
3swp_D | 5e-55 | 13 | 172 | 17 | 174 | NAC domain-containing protein 19 |
4dul_A | 4e-55 | 13 | 172 | 14 | 171 | NAC domain-containing protein 19 |
4dul_B | 4e-55 | 13 | 172 | 14 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | DQ028773 | 0.0 | DQ028773.1 Glycine max NAC domain protein NAC5 (NAC5) mRNA, complete cds. |