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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.009G147500.1 |
Common Name | PHAVU_009G147500g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
Trihelix |
Protein Properties |
Length: 515aa MW: 58891 Da PI: 7.0309 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.009G147500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 93 | 3e-29 | 42 | 127 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+k+e++aL+++r++m+ ++r+++ k+plWe+vs+k++e g+ rs+k+C+ek+en+ k++++ikeg++++ s+ s+t+++f+qlea
Phvul.009G147500.1 42 RWPKEETMALLNIRSDMDVAFRDTNPKAPLWEQVSRKLAELGYIRSAKKCREKFENIYKYHRRIKEGRSGK-SNGSKTYRFFEQLEA 127
8********************************************************************86.78889********85 PP
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2 | trihelix | 94.1 | 1.3e-29 | 337 | 427 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85
rW+k+ev aLi++r++++ +++ ++ +k+plWee+s +m+ g++rs+k+Ckekwen+nk++k++ke +k++ +e+s+tcpy+++l
Phvul.009G147500.1 337 RWPKDEVEALIRLRTQLDVQSQGNSnssngvSKGPLWEEISLAMKGLGYNRSAKRCKEKWENINKYFKRMKEKNKRK-PEDSKTCPYYHHL 426
8**************9988888543345666********************************************96.9***********9 PP
trihelix 86 e 86
e
Phvul.009G147500.1 427 E 427
7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 515 aa
Download sequence Send
to blast |
MLQISTSPET PLANPEGDAA PVSEGLKPEH GEDGDRNSAA SRWPKEETMA LLNIRSDMDV 60 AFRDTNPKAP LWEQVSRKLA ELGYIRSAKK CREKFENIYK YHRRIKEGRS GKSNGSKTYR 120 FFEQLEALEG HHSLLPPSVS DPETTTTTTT HVPHNKINPS NNFDVILDAV PCSVSAYAGE 180 HSSSTTSCSG KEFRKKKLTR FLEGLMREVI EKQETLQRKF MEVLEKCEKD RVAREEAWKK 240 EELALIKKER ELLAQERSIA AAKDEVVLAF LRKFAQAEGT VQLLEKIQVQ NDKHRNMQQS 300 GNINFSANGG GDVSDVDKRE CGNNLSVRNF VHMSSSRWPK DEVEALIRLR TQLDVQSQGN 360 SNSSNGVSKG PLWEEISLAM KGLGYNRSAK RCKEKWENIN KYFKRMKEKN KRKPEDSKTC 420 PYYHHLEVLY SKKPKRVDVN DFGKQLKPEE LLMHIMESQS QEERQAQEQQ QLQSQSSSEH 480 DERENRDKHE EDDEDQNGFQ DVMVEDSPSI TIMS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 0.0 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |