PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.009G138900.1
Common NamePHAVU_009G138900g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family WRKY
Protein Properties Length: 194aa    MW: 22100.1 Da    PI: 6.7149
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.009G138900.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.81.1e-28107165159
                         ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         +dDgy+WrKYG+K+vk++ +pr+YY+C+ +gC vkk+ver+++d ++v +tY g Hnhe
  Phvul.009G138900.1 107 MDDGYKWRKYGKKTVKNNSNPRNYYKCSDEGCIVKKRVERDRDDSSYVLTTYVGIHNHE 165
                         59********************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.3E-3094167IPR003657WRKY domain
SuperFamilySSF1182902.09E-2799167IPR003657WRKY domain
PROSITE profilePS5081129.436102167IPR003657WRKY domain
SMARTSM007747.2E-30107166IPR003657WRKY domain
PfamPF031061.7E-22108165IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MEYYFGNPNF RHSAVDNMAA SPSSEFMISD YLILEDVVDY HHEECWSQST ETESSEKATS  60
SDASHGFGDA TSTSTNNIKC KNKGLKRRKA EVSQSITLRT RSQLEIMDDG YKWRKYGKKT  120
VKNNSNPRNY YKCSDEGCIV KKRVERDRDD SSYVLTTYVG IHNHETPSSY YTQMSLLHSD  180
DWNSHPSATQ NSS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-2393168378Probable WRKY transcription factor 4
2lex_A2e-2393168378Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18288KGLKRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.009G138900.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007137588.11e-144hypothetical protein PHAVU_009G138900g
TrEMBLV7AV951e-143V7AV95_PHAVU; Uncharacterized protein
STRINGXP_007137588.11e-143(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112034110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.13e-42WRKY DNA-binding protein 51