|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Phvul.009G137500.1 |
Common Name | PHAVU_009G137500g |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
|
Family |
WRKY |
Protein Properties |
Length: 353aa MW: 39557.2 Da PI: 5.8769 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.009G137500.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 89.8 | 2.2e-28 | 128 | 189 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK++ g+ +pr+YYrCt++ gC+++k+v+rs+ed +++ei Y+g+H+++
Phvul.009G137500.1 128 LDDGYSWRKYGQKDILGAMYPRGYYRCTHRtvqGCMATKQVQRSDEDSTIFEINYRGKHTCT 189
59***************************99999**************************96 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MDNMGDPKSI MKELLQGLEL ARQLQVYLHT PSSSQETRDL IQKIISTFEK ALEMVNWKGP 60 VPKGESSQLP ITAAIRMSDS PISSSPQSED SERDLKDQDH NAFRKRNTLP RWTKRIRVTP 120 GMGVEGPLDD GYSWRKYGQK DILGAMYPRG YYRCTHRTVQ GCMATKQVQR SDEDSTIFEI 180 NYRGKHTCTV AHNMGSSSII PLENQEPSLN NTNQQQNILQ SLEQQPNDLL LNLREGLRVQ 240 TENLDSTDQS FAPFLFPLST NIKNEGQVFP PHLLENFSSP YMSPATSGIS HYSVSPSRVN 300 SVVGNPNLAT FESHINDMIP AATSAPNSAA VALEFPFNQF EFDGQNFRFD NP*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 0.0 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |