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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.009G104400.1 |
Common Name | PHAVU_009G104400g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
NAC |
Protein Properties |
Length: 359aa MW: 39384.5 Da PI: 8.9391 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.009G104400.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 175.2 | 1.8e-54 | 27 | 154 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeelv++yL +k+++++++ ++i++vd++k+ePw+Lp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke
Phvul.009G104400.1 27 LPPGFRFHPTDEELVTCYLLNKISDSNFTG-RAITDVDLNKSEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKE 116
79*************************999.89***************99999************************************** PP
NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+l++ ++el+g+kktLvfykgrap+gek++Wvmheyr+
Phvul.009G104400.1 117 ILNSaTSELIGMKKTLVFYKGRAPRGEKSNWVMHEYRM 154
**9878899***************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 359 aa
Download sequence Send
to blast |
MQKEKEAIIK EGTDTEMEGS LPKEETLPPG FRFHPTDEEL VTCYLLNKIS DSNFTGRAIT 60 DVDLNKSEPW ELPGKAKMGE KEWYFFSLRD RKYPTGVRTN RATNTGYWKT TGKDKEILNS 120 ATSELIGMKK TLVFYKGRAP RGEKSNWVMH EYRMHSKPTF RTTRQDEWVV CRVFKKSGGA 180 KKFPSSNHAR AVNPYSLEIG PNIMPPPLMQ LGDPSAHFLY GRNYMSSVEL GELARVLRGG 240 GSTSSVNQPM QSQLGYPTSA AAAGGGGGFT ISGLNLNLGG GGGATSTTQP IFRPMQPSSA 300 APVHTMAQVV DVNSSMMTSG SLGADVGYGS ELSNMNSHGN RFMGMEHCMD LDNYWPSY*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 6e-57 | 26 | 182 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 6e-57 | 26 | 182 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 6e-57 | 26 | 182 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 6e-57 | 26 | 182 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-57 | 26 | 182 | 19 | 174 | NAC domain-containing protein 19 |
3swm_B | 7e-57 | 26 | 182 | 19 | 174 | NAC domain-containing protein 19 |
3swm_C | 7e-57 | 26 | 182 | 19 | 174 | NAC domain-containing protein 19 |
3swm_D | 7e-57 | 26 | 182 | 19 | 174 | NAC domain-containing protein 19 |
3swp_A | 7e-57 | 26 | 182 | 19 | 174 | NAC domain-containing protein 19 |
3swp_B | 7e-57 | 26 | 182 | 19 | 174 | NAC domain-containing protein 19 |
3swp_C | 7e-57 | 26 | 182 | 19 | 174 | NAC domain-containing protein 19 |
3swp_D | 7e-57 | 26 | 182 | 19 | 174 | NAC domain-containing protein 19 |
4dul_A | 6e-57 | 26 | 182 | 16 | 171 | NAC domain-containing protein 19 |
4dul_B | 6e-57 | 26 | 182 | 16 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 1e-120 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |