PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.009G104100.1
Common NamePHAVU_009G104100g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 294aa    MW: 31992.5 Da    PI: 5.7373
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.009G104100.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.71.4e-14121175357
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                         elkr rrk +NR +ArrsR+RK+a+++ Le  v++L+ eN +L k+ +  +++  
  Phvul.009G104100.1 121 ELKRLRRKVSNRNSARRSRRRKQAQLADLESQVEKLKVENATLYKQFNDASQHFR 175
                         79******************************************99888777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.3E-11119183IPR004827Basic-leucine zipper domain
PfamPF001702.2E-12121171IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.024121184IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.46E-10122173No hitNo description
Gene3DG3DSA:1.20.5.1703.3E-8123158No hitNo description
PROSITE patternPS000360126141IPR004827Basic-leucine zipper domain
CDDcd147021.12E-7140175No hitNo description
Gene3DG3DSA:1.20.5.109.6E-5159193No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MTTTESDLDN DFPNLDELRY LNLAGTDVFA AFQNLLPDAI TSFSTCGLTD PFSSQNLTPK  60
HSTITATIDS RSSICGTATV GSPVSANKPE GWKNDMKGAT SGSSEPSDED GPCEQSTNAV  120
ELKRLRRKVS NRNSARRSRR RKQAQLADLE SQVEKLKVEN ATLYKQFNDA SQHFREADTN  180
NRVLKSDVEA LRAKVKLAED MVTRGSFTTL NNQLLPTQCQ MSTPPPLNTT NLRRMAHVSP  240
TITVHGNDGA YNGATVCGQN SDLGNLDMSF NDMNNVNGVM SDGMSCGSIW PPY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125141RRKVSNRNSARRSRRRK
2135142RRSRRRKQ
3137142SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.009G104100.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007137151.10.0hypothetical protein PHAVU_009G104100g
SwissprotQ9FUD32e-57BZIP9_ARATH; Basic leucine zipper 9
TrEMBLV7AV490.0V7AV49_PHAVU; Uncharacterized protein
STRINGXP_007137151.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.11e-47basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]