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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.009G077100.1 |
Common Name | PHAVU_009G077100g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
TALE |
Protein Properties |
Length: 562aa MW: 62509.4 Da PI: 6.2787 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.009G077100.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 26 | 1.6e-08 | 480 | 518 | 18 | 54 |
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
+F++ ++yp+ +e+ LA k gLt +qV++WF N R +
Phvul.009G077100.1 480 MFQNflHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVR 518
5887779******************************88 PP
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2 | BELL | 74.2 | 2.1e-24 | 353 | 421 | 2 | 71 |
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71
r+ ++kka+Ll+ll+ Vd+rY+q+ ++++tvis+F+a+++l++ ++++++Al++iS ++ L+++i++
Phvul.009G077100.1 353 RRVAESKKAQLLTLLQLVDNRYSQCLDEIHTVISAFHAATELDP-QIHAHFALQTISVLYKDLRERISNY 421
566799**************************************.**********************975 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0008285 | Biological Process | negative regulation of cell proliferation |
GO:0009640 | Biological Process | photomorphogenesis |
GO:0010073 | Biological Process | meristem maintenance |
GO:0010227 | Biological Process | floral organ abscission |
GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
GO:0010371 | Biological Process | regulation of gibberellin biosynthetic process |
GO:0090470 | Biological Process | shoot organ boundary specification |
GO:0005634 | Cellular Component | nucleus |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 562 aa
Download sequence Send
to blast |
MERDIYIAPL DISGRGATVI DEISQHSTSN PLIQCYSLDL NNQSHVMNGI SMLSGEQVEP 60 ISNVHADACF INQSIIADSS PLVTSRRKSI VGDASNPMEN TEFLEHLVGG VPLTPASLAA 120 ILAARIGLEE DLENSAALPP SICSTGALEV FFNNLQGTSN PLSATFEDCD YNEVPSKWNA 180 NKFHKAPEIG GTCEPYSSIA NLDPNEWTTS NVANMASYAY CSSNFSKELS LSLATSTTAG 240 QYSEVTCSNM TPCMNGTISC SSSRQLSMNL GGNKYVQFSP EVLESRYLLG IQEILAQIAR 300 YSFENLKQLN YSAPGNRAGG NRSASAFPPM RNILTDHNAN SIYESHAESP LQRRVAESKK 360 AQLLTLLQLV DNRYSQCLDE IHTVISAFHA ATELDPQIHA HFALQTISVL YKDLRERISN 420 YILAMGSSFN KSCAEENEWS IETSFLQKQW ALQQLKRKDQ LWRPQRGLPE RSVSVLRAWM 480 FQNFLHPYPK DAEKHLLAVK SGLTRSQVSN WFINARVRLW KPMIEEMYAE MNKRKACRNE 540 EGIQNNHGNR IGMSNQRFNV N*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor which may be involved in the signal transduction pathway downstream of the COP1 gene. Controls floral competency as a specific activator of FLC expression. Is responsive of the nuclear import of SHOOT MERISTEMLESS (STM). {ECO:0000269|PubMed:17908157}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By light. In etiolated seedlings, maximally expressed after 3 days of illumination. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 0.0 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |