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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Phvul.009G075300.1 |
| Common Name | PHAVU_009G0753001g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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| Family |
HD-ZIP |
| Protein Properties |
Length: 243aa MW: 27997.9 Da PI: 8.9303 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.009G075300.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.1 | 1.8e-19 | 128 | 182 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+k+ ++tkeq +Le+ F+++++++ ++++eLAkkl+L rqV vWFqNrRa+ k
Phvul.009G075300.1 128 KKKLRLTKEQSAVLEDSFKEHSTLTLTHKQELAKKLNLRARQVEVWFQNRRARNK 182
788899***********************************************98 PP
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| 2 | HD-ZIP_I/II | 110 | 1.6e-35 | 128 | 216 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+kk+rl+keq+++LE+sF+e+++L+ ++K+ela++L+l++rqv+vWFqnrRAR k+kq+E+++e Lk+++++l+een+ L+ke eeL+ +
Phvul.009G075300.1 128 KKKLRLTKEQSAVLEDSFKEHSTLTLTHKQELAKKLNLRARQVEVWFQNRRARNKLKQTEVNCELLKKCCKSLTEENKILQKELEELK-S 216
59*************************************************************************************9.4 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 243 aa
Download sequence Send
to blast |
MLFDISNPCL RLGLGLQDQS QETCMKSHEQ RQKKKEADPR NRAHPSLRLR PPHDDANNNH 60
QVTKTDSDEY FNFHPHASPA SAVSSFFNSS SFIKRERDQL AGQELELEVE KFPSNLRVVD 120
LDEYGCSKKK LRLTKEQSAV LEDSFKEHST LTLTHKQELA KKLNLRARQV EVWFQNRRAR 180
NKLKQTEVNC ELLKKCCKSL TEENKILQKE LEELKSMKTA LQGPIFMQLP VATLRICPSS 240
YC*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 126 | 132 | SKKKLRL |
| 2 | 176 | 184 | RRARNKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015035 | 3e-95 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |
