PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Phvul.009G065500.1 | ||||||||
Common Name | PHAVU_009G065500g | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family | bZIP | ||||||||
Protein Properties | Length: 416aa MW: 45027.7 Da PI: 10.2585 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.9 | 1.2e-14 | 337 | 386 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ e+ + Phvul.009G065500.1 337 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELQKKQAEIME 386 69***************************************998777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.7E-14 | 333 | 398 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.312 | 335 | 386 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.63E-11 | 337 | 386 | No hit | No description |
CDD | cd14707 | 2.97E-27 | 337 | 391 | No hit | No description |
Pfam | PF00170 | 1.1E-12 | 337 | 387 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.3E-15 | 337 | 386 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 340 | 355 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0010255 | Biological Process | glucose mediated signaling pathway | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 416 aa Download sequence Send to blast |
MNFKSFGNEA GGDGGGRPPG NFSLTRQSSV YSLTFDEFMN TMGGSGKDFG SMNMDELLKN 60 IWTAEEVQTM ASAGVAADDG GAGISHLQRQ GSLTLPRTLS QKTVDEVWKD ISKDYGGHGE 120 PNLAQTPRQP TLREMTLEEF LVRAGVVRED AKPNDGVFMD LARAGNNNGL GFEFQQMNKV 180 AAATGLMGNR LNNDPLVGLQ SSANLPLNVN GVRSSSQQPQ MQSPQSQQQH HQQQIFPKQS 240 AMSYAVAQMP QGMVRGGIVG LGGDQGLSVQ GGGIGMVGLA PGSVHVATGS PAANQLSGDK 300 MAKSNGDTSS VSPVPYVFNG GMRGRKSGGA VEKVIERRQR RMIKNRESAA RSRARKQAYT 360 MELEAEVAKL KEENQELQKK QAEIMEIQKN QVKEMMNLQR EVKRRRLRRT QTGPW* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 402 | 406 | KRRRL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00186 | DAP | Transfer from AT1G45249 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Phvul.009G065500.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AF369792 | 0.0 | AF369792.1 Phaseolus vulgaris bZIP transcription factor 6 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007136688.1 | 0.0 | hypothetical protein PHAVU_009G065500g | ||||
Refseq | XP_007136689.1 | 0.0 | hypothetical protein PHAVU_009G065500g | ||||
Swissprot | Q9M7Q4 | 1e-120 | AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | V7ASR4 | 0.0 | V7ASR4_PHAVU; Uncharacterized protein | ||||
STRING | XP_007136688.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1962 | 34 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G45249.1 | 3e-90 | abscisic acid responsive elements-binding factor 2 |
Link Out ? help Back to Top | |
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Phytozome | Phvul.009G065500.1 |
Entrez Gene | 18619339 |
Publications ? help Back to Top | |||
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