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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.009G060900.1 |
Common Name | PHAVU_009G060900g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
bZIP |
Protein Properties |
Length: 146aa MW: 16980 Da PI: 6.5259 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.009G060900.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 45.8 | 1.4e-14 | 31 | 89 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
++ +rkq+NRe+ArrsR RK+ +e L++ v e+++eN++ ++++ ++++ k ++e+
Phvul.009G060900.1 31 RKNKRKQSNRESARRSRMRKRDHLEDLRKQVSEFTKENREILATIDMTTQHYLKIEAEN 89
689************************************************99988776 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 146 aa
Download sequence Send
to blast |
MASSSGNSSI STKIQSSGSE EDLQVLTMDE RKNKRKQSNR ESARRSRMRK RDHLEDLRKQ 60 VSEFTKENRE ILATIDMTTQ HYLKIEAENC VLRAQMGELD QRLQSLNDMI VDIMNTTTFY 120 ERDCYLTSTQ NFTNTLCLNQ PVFEW*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 1e-175 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |