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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Phvul.009G049600.1 |
Common Name | PHAVU_009G049600g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
HD-ZIP |
Protein Properties |
Length: 245aa MW: 28226.2 Da PI: 5.3557 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.009G049600.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 61.2 | 1.6e-19 | 34 | 86 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++f++eq++ Le Fe ++++ +++ +LA+ lgL+ rqV +WFqNrRa++k
Phvul.009G049600.1 34 KRRFSDEQIRSLECIFETESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWK 86
568*************************************************9 PP
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2 | HD-ZIP_I/II | 121.9 | 3.1e-39 | 32 | 124 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
e+krr+s+eq+++LE Fe+e+kLep++K++lar+Lglqprqva+WFqnrRAR+k+k++E++y++Lk++yd+l+++ e+L+ke+e+L+ el
Phvul.009G049600.1 32 ENKRRFSDEQIRSLECIFETESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWKSKRIEQEYRKLKDEYDNLASRFESLKKEKESLQVEL 122
579*************************************************************************************999 PP
HD-ZIP_I/II 92 ke 93
++
Phvul.009G049600.1 123 QK 124
86 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MEGDENIQAS KGKNVESFAC LEASRKKNKK IENKRRFSDE QIRSLECIFE TESKLEPRKK 60 MQLARDLGLQ PRQVAIWFQN RRARWKSKRI EQEYRKLKDE YDNLASRFES LKKEKESLQV 120 ELQKLSDLVE SSHDGGREDK GAKEHSIEDG GSGSGYSSWK PEAKPRFSTE GVEERVGVYS 180 DDQNENSIIR SEKSEDKGHQ LLRVDDNDQA EIPLASLEKW YSSVDPNGIL DQSCSSSQWL 240 DFWT*
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